Show simple item record

dc.contributor.authorBijlsma, Lubertus
dc.contributor.authorBerntssen, Marc H. G.
dc.contributor.authorMerel, Sylvain
dc.date.accessioned2019-06-07T07:34:50Z
dc.date.available2019-06-07T07:34:50Z
dc.date.issued2019-04-11
dc.identifier.citationBIJLSMA, L.; BERNTSSEN, M. H. G.; MEREL, S. A Refined Nontarget Workflow for the Investigation of Metabolites through the Prioritization by in Silico Prediction Tools. Analytical chemistry, 2019, vol. 91, no 9, p. 6321-6328ca_CA
dc.identifier.issn0003-2700
dc.identifier.issn1520-6882
dc.identifier.urihttp://hdl.handle.net/10234/182752
dc.description.abstractThe application of nontargeted strategies based on high-resolution mass spectrometry (HRMS) directed toward the discovery of metabolites of known contaminants in fish is an interesting alternative to true nontarget screening. To reduce prolonged and costly laboratory experiments, recent advances in computing power have permitted the development of comprehensive knowledge-based software to predict the metabolic fate of chemicals. In addition, machine-based learning tools allow the prediction of chromatographic retention times (RT) or collision cross section (CCS) values when using ion mobility spectrometry (IMS). These tools can ease data evaluation and strengthen the confidence in the identification of compounds. The current work explores the capabilities of in silico prediction tools, refined by the use of RT and CCS prediction, to prioritize and facilitate nontarget liquid chromatography (LC)–IMS–HRMS data processing. The fate of the insecticide pirimiphos-methyl (PM) in farmed Atlantic salmon exposed to contaminated feed was used as a case study. The theoretical prediction of 60 potentially relevant biological PM metabolites permitted the prioritization of screening in different salmon tissues (liver, kidney, bile, muscle, and fat) of known and unknown PM metabolites. An average of 43 potential positives was found in the sample matrixes based on the accurate mass of protonated molecules (mass error ≤5 ppm). The application of different tolerance filters for RT (Δ ≤ 2 min) and CCS (Δ ≤ 6%) based on predicted values permitted us to reduce this number up to 66% of the features. Finally, five PM metabolites could be identified; two known metabolites (2-DAMP and N-desethyl PM) were confirmed with a standard, whereas three previously unknown metabolites (2-DAMP glucuronide, didesethyl PM, and hydroxy-2-DAMP glucuronide) were tentatively identified in different matrixes, allowing the first proposition of a metabolic pathway in fish.ca_CA
dc.format.extent8 p.ca_CA
dc.language.isoengca_CA
dc.publisherAmerican Chemical Societyca_CA
dc.relation.isPartOfAnalytical chemistry, 2019, vol. 91, no 9ca_CA
dc.rightsCopyright © American Chemical Societyca_CA
dc.subjectmetabolitesca_CA
dc.subjectchromatographic retentionca_CA
dc.subjectcollision cross sectionsca_CA
dc.subjectsilico prediction toolsca_CA
dc.subjectpesticidesca_CA
dc.titleA Refined Nontarget Workflow for the Investigation of Metabolites through the Prioritization by in Silico Prediction Toolsca_CA
dc.typeinfo:eu-repo/semantics/articleca_CA
dc.identifier.doihttps://doi.org/10.1021/acs.analchem.9b01218
dc.relation.projectIDNorwegian Research council project "AQUASAFE": 254807ca_CA
dc.rights.accessRightsinfo:eu-repo/semantics/restrictedAccessca_CA
dc.relation.publisherVersionhttps://pubs.acs.org/doi/10.1021/acs.analchem.9b01218ca_CA
dc.contributor.funderThe authors would like to thank Dr. G. Rosenlund and Tarn Helgoy Thomsen for designing, sampling, and performing the feeding trial at the Skretting ARC, Lerang Research Station. The authors thank Borja Garlito Molina for performing sample extraction and facilitating the UHPLC-IMS-QTOF MS data. L.B. wishes to thank Marc Berntssen and the Institute of Marine Research (Norway) for hosting him as a visiting researcher. S.M. is grateful to Dr. Felix Hernandez for allowing him to visit his research group at the University of Jaume I (Spain).ca_CA
dc.type.versioninfo:eu-repo/semantics/publishedVersionca_CA


Files in this item

FilesSizeFormatView

There are no files associated with this item.

This item appears in the following Collection(s)

Show simple item record